org.concord.molecular.ui
Class MolecularView

java.lang.Object
  |
  +--java.awt.Component
        |
        +--java.awt.Container
              |
              +--javax.swing.JComponent
                    |
                    +--javax.swing.JPanel
                          |
                          +--org.concord.molecular.ui.MolecularView

All Implemented Interfaces:

javax.accessibility.Accessible, AtomicDataListener, java.util.EventListener, java.awt.image.ImageObserver, java.awt.MenuContainer, java.beans.PropertyChangeListener, java.io.Serializable

public class MolecularView

extends javax.swing.JPanel

implements AtomicDataListener, java.beans.PropertyChangeListener

See Also:

Serialized Form

Inner classes inherited from class javax.swing.JPanel

javax.swing.JPanel.AccessibleJPanel

Inner classes inherited from class javax.swing.JComponent

javax.swing.JComponent.AccessibleJComponent

Inner classes inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

Inner classes inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent

Field Summary

protected org.concord.oslet.AnimatorPanel	animator
protected org.concord.oslet.BallChooser	balls
static java.lang.String	CRICKIUM
protected double	defaultStep
protected double	epsilon1
protected double	epsilon2
protected double	epsilon3
protected double	epsilon4
protected double	keConstant
protected double	keFactor
protected double	mass1
protected double	mass2
protected double	mass3
protected double	mass4
protected DefaultAtomicModel	model
static java.lang.String	NEWTONIUM
static java.lang.String	PAULINGIUM
protected org.concord.oslet.AtomPropertiesEditor	properties
protected double	sigma1
protected double	sigma2
protected double	sigma3
protected double	sigma4
protected double	step
protected java.beans.PropertyChangeSupport	support
static java.lang.String	WATSONIUM

Fields inherited from class javax.swing.JComponent

accessibleContext, listenerList, TOOL_TIP_TEXT_KEY, ui, UNDEFINED_CONDITION, WHEN_ANCESTOR_OF_FOCUSED_COMPONENT, WHEN_FOCUSED, WHEN_IN_FOCUSED_WINDOW

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

MolecularView()
Constructor for the MolecularView.

Method Summary

void	addAtom(int atomType, int x, int y) Short concise description.
void	addPropertyChangeListener(java.beans.PropertyChangeListener listener)
void	atomicDataUpdate(AtomicDataEvent event)
org.concord.pseudojava2.awt.geom.Rectangle2D.Double	createRectangle2DDouble(double x, double y, double width, double height)
org.concord.pseudojava2.awt.geom.Rectangle2D.Float	createRectangle2DFloat(float x, float y, float width, float height)
org.concord.oslet.AnimatorPanel	getAnimator() Returns the AnimatorPanel of this view.
org.concord.oslet.models.AtomicModel	getAtomicModel() Returns atomic model.
org.concord.oslet.AtomPropertiesEditor	getAtomPropertiesEditor()
boolean	getDataViewable() Returns boolean viewable state.
boolean	getEditable() Returns boolean editable state.
org.concord.oslet.models.MolecularModel	getMolecularModel()
protected void	initializeFromProperties(org.concord.oslet.AtomPropertiesEditor properties)
void	loadModel(java.lang.String path) Load a previously saved AtomicModel.
void	propertyChange(java.beans.PropertyChangeEvent event)
void	removePropertyChangeListener(java.beans.PropertyChangeListener listener)
void	reset() Reset the MolecularView object.
void	setAddAtom(java.lang.String type) Tells the animator panel which type of atom to add.
void	setAtomicModel(org.concord.oslet.models.AtomicModel model)
void	setDataViewable(boolean viewable) Set atom data viewable in animator panel.
void	setEditable(boolean editable) Sets contained AnimatorPanel editable.
void	setKEConstant(double constant)
void	setKEConstant(float constant)
void	setKEFactor(double factor)
void	setKEFactor(float factor)
void	setMolecularModel(org.concord.oslet.models.MolecularModel model)
void	setSize(int width, int height)

Methods inherited from class javax.swing.JPanel

getAccessibleContext, getUIClassID, paramString, updateUI

Methods inherited from class javax.swing.JComponent

addAncestorListener, addNotify, addPropertyChangeListener, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAutoscrolls, getBorder, getBounds, getClientProperty, getComponentGraphics, getConditionForKeyStroke, getDebugGraphicsOptions, getGraphics, getHeight, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPreferredSize, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getToolTipText, getTopLevelAncestor, getVerifyInputWhenFocusTarget, getVisibleRect, getWidth, getX, getY, grabFocus, hasFocus, hide, isDoubleBuffered, isFocusCycleRoot, isFocusTraversable, isLightweightComponent, isManagingFocus, isMaximumSizeSet, isMinimumSizeSet, isOpaque, isOptimizedDrawingEnabled, isPaintingTile, isPreferredSizeSet, isRequestFocusEnabled, isValidateRoot, paint, paintBorder, paintChildren, paintComponent, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processFocusEvent, processKeyBinding, processKeyEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeNotify, removePropertyChangeListener, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setDebugGraphicsOptions, setDoubleBuffered, setEnabled, setFont, setForeground, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getLayout, insets, invalidate, isAncestorOf, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setLayout, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, getBackground, getBounds, getColorModel, getComponentOrientation, getCursor, getDropTarget, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getInputContext, getInputMethodRequests, getLocale, getLocation, getLocationOnScreen, getName, getParent, getPeer, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, imageUpdate, inside, isDisplayable, isEnabled, isLightweight, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, repaint, repaint, repaint, resize, resize, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setLocale, setLocation, setLocation, setName, setSize, show, show, size, toString, transferFocus

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

NEWTONIUM

public static final java.lang.String NEWTONIUM

PAULINGIUM

public static final java.lang.String PAULINGIUM

WATSONIUM

public static final java.lang.String WATSONIUM

CRICKIUM

public static final java.lang.String CRICKIUM

support

protected java.beans.PropertyChangeSupport support

balls

protected org.concord.oslet.BallChooser balls

properties

protected org.concord.oslet.AtomPropertiesEditor properties

defaultStep

protected double defaultStep

step

protected double step

model

protected DefaultAtomicModel model

animator

protected org.concord.oslet.AnimatorPanel animator

mass1

protected double mass1

mass2

protected double mass2

mass3

protected double mass3

mass4

protected double mass4

sigma1

protected double sigma1

sigma2

protected double sigma2

sigma3

protected double sigma3

sigma4

protected double sigma4

epsilon1

protected double epsilon1

epsilon2

protected double epsilon2

epsilon3

protected double epsilon3

epsilon4

protected double epsilon4

keConstant

protected double keConstant

keFactor

protected double keFactor

Constructor Detail

MolecularView

public MolecularView()

Constructor for the MolecularView. This is a convenience class for dealing with the AnimatorPanel of Oslet2D.

Method Detail

reset

public void reset()

Reset the MolecularView object. The local references of the animator panel and the molecular model are set to null so they will be recreated.

setKEConstant

public void setKEConstant(double constant)

setKEFactor

public void setKEFactor(double factor)

setKEConstant

public void setKEConstant(float constant)

setKEFactor

public void setKEFactor(float factor)

getAnimator

public org.concord.oslet.AnimatorPanel getAnimator()

Returns the AnimatorPanel of this view. This is for the developer who needs direct access to the AnimatorPanel. This method will create the animator panel if it does not already exits.

setSize

public void setSize(int width,
                    int height)

Overrides:

setSize in class java.awt.Component

setEditable

public void setEditable(boolean editable)

Sets contained AnimatorPanel editable. This allows atoms to be added graphically.

Parameters:

editable - - boolean.

getEditable

public boolean getEditable()

Returns boolean editable state.

setDataViewable

public void setDataViewable(boolean viewable)

Set atom data viewable in animator panel. Right clicking shows atom data.

Parameters:

viewable - boolean viewable state.

getDataViewable

public boolean getDataViewable()

Returns boolean viewable state.

getAtomPropertiesEditor

public org.concord.oslet.AtomPropertiesEditor getAtomPropertiesEditor()

getAtomicModel

public org.concord.oslet.models.AtomicModel getAtomicModel()

Returns atomic model. Creates a new atomic model if necessary and sets its size to that of the view.

setAtomicModel

public void setAtomicModel(org.concord.oslet.models.AtomicModel model)

getMolecularModel

public org.concord.oslet.models.MolecularModel getMolecularModel()

setMolecularModel

public void setMolecularModel(org.concord.oslet.models.MolecularModel model)

loadModel

public void loadModel(java.lang.String path)

Load a previously saved AtomicModel. Additional verbose description.

Parameters:

path - String path to the model.mml file.

createRectangle2DFloat

public org.concord.pseudojava2.awt.geom.Rectangle2D.Float createRectangle2DFloat(float x,
                                                                                 float y,
                                                                                 float width,
                                                                                 float height)

createRectangle2DDouble

public org.concord.pseudojava2.awt.geom.Rectangle2D.Double createRectangle2DDouble(double x,
                                                                                   double y,
                                                                                   double width,
                                                                                   double height)

initializeFromProperties

protected void initializeFromProperties(org.concord.oslet.AtomPropertiesEditor properties)

setAddAtom

public void setAddAtom(java.lang.String type)

Tells the animator panel which type of atom to add.

Parameters:

type - String atom type.

addAtom

public void addAtom(int atomType,
                    int x,
                    int y)

Short concise description. Additional verbose description.

Parameters:

atomType - description.

x - int x location.

y - int y location.

atomicDataUpdate

public void atomicDataUpdate(AtomicDataEvent event)

Specified by:

atomicDataUpdate in interface AtomicDataListener

propertyChange

public void propertyChange(java.beans.PropertyChangeEvent event)

Specified by:

propertyChange in interface java.beans.PropertyChangeListener

addPropertyChangeListener

public void addPropertyChangeListener(java.beans.PropertyChangeListener listener)

Overrides:

addPropertyChangeListener in class javax.swing.JComponent

removePropertyChangeListener

public void removePropertyChangeListener(java.beans.PropertyChangeListener listener)

Overrides:

removePropertyChangeListener in class javax.swing.JComponent