Hierarchy For Package org.concord.biologica.engine

Package Hierarchies:

All Packages

Class Hierarchy

• class java.lang.Object
  • class org.concord.biologica.engine.AminoAcid
  • class org.concord.biologica.engine.Base
  • class org.concord.biologica.engine.BioEngine (implements java.io.Serializable)
  • class org.concord.biologica.engine.BioLogicaSpecies (implements org.xml.sax.DocumentHandler)
  • class org.concord.biologica.engine.Branch
  • class org.concord.biologica.engine.ChromosomeSpecification
  • class org.concord.biologica.engine.Codon
  • class org.concord.biologica.engine.CrossOver
  • class org.concord.biologica.engine.Debug
  • class org.concord.biologica.engine.Elements
  • class org.concord.biologica.engine.EngineProp
  • class org.concord.biologica.engine.EngineStrings
  • class org.xml.sax.HandlerBase (implements org.xml.sax.DocumentHandler, org.xml.sax.DTDHandler, org.xml.sax.EntityResolver, org.xml.sax.ErrorHandler)
    • class org.concord.biologica.engine.ElementContext
    • class org.concord.biologica.engine.EngineObject
      • class org.concord.biologica.engine.AlgorithmicNucleicAcid (implements org.concord.biologica.engine.INucleicAcid, java.io.Serializable)
      • class org.concord.biologica.engine.Characteristic (implements java.io.Serializable)
      • class org.concord.biologica.engine.Environment (implements java.io.Serializable)
      • class org.concord.biologica.engine.Family (implements java.io.Serializable)
      • class org.concord.biologica.engine.Gene (implements java.io.Serializable)
      • class org.concord.biologica.engine.GenotypeToPhenotypeRule (implements java.beans.PropertyChangeListener, java.io.Serializable)
      • class org.concord.biologica.engine.NucleicAcid (implements org.concord.biologica.engine.INucleicAcid, org.concord.biologica.engine.INucleicAcidHolder, java.io.Serializable)
      • class org.concord.biologica.engine.Organism (implements java.io.Serializable)
      • class org.concord.biologica.engine.OrganismAllele (implements org.concord.biologica.engine.INucleicAcidHolder, java.io.Serializable)
      • class org.concord.biologica.engine.OrganismAllelePair (implements java.beans.PropertyChangeListener, java.io.Serializable)
      • class org.concord.biologica.engine.OrganismChromosome (implements java.io.Serializable)
      • class org.concord.biologica.engine.OrganismChromosomePair (implements java.beans.PropertyChangeListener, java.io.Serializable)
      • class org.concord.biologica.engine.OrganismImage (implements java.beans.PropertyChangeListener, java.io.Serializable)
      • class org.concord.biologica.engine.RawNucleicAcid (implements org.concord.biologica.engine.INucleicAcid, java.io.Serializable)
      • class org.concord.biologica.engine.Species (implements java.beans.PropertyChangeListener, java.io.Serializable)
      • class org.concord.biologica.engine.SpeciesAllele (implements org.concord.biologica.engine.INucleicAcidHolder, java.io.Serializable)
      • class org.concord.biologica.engine.SpeciesChromosome (implements org.concord.biologica.engine.IChromosome, java.io.Serializable)
      • class org.concord.biologica.engine.SpeciesImage (implements java.io.Serializable)
      • class org.concord.biologica.engine.SpeciesImageColumn (implements java.beans.PropertyChangeListener, java.io.Serializable)
      • class org.concord.biologica.engine.SpeciesImageRow (implements java.beans.PropertyChangeListener, java.io.Serializable)
      • class org.concord.biologica.engine.Terrain (implements java.io.Serializable)
      • class org.concord.biologica.engine.Trait (implements java.io.Serializable)
      • class org.concord.biologica.engine.World (implements org.xml.sax.DocumentHandler, java.io.Serializable)
  • class org.concord.biologica.engine.ImportContext
  • class org.concord.biologica.engine.PathStrings
  • class java.beans.SimpleBeanInfo (implements java.beans.BeanInfo)
    • class org.concord.biologica.engine.BioEngineBeanInfo
  • class java.lang.Throwable (implements java.io.Serializable)
    • class java.lang.Exception
      • class java.lang.RuntimeException
        • class org.concord.biologica.engine.InternalEngineException
        • class org.concord.biologica.engine.NotBioLogicaFileException
        • class org.concord.biologica.engine.ObjectDeletedException
        • class org.concord.biologica.engine.ObjectLockedException

Interface Hierarchy

• interface org.concord.biologica.engine.IChromosome
• interface org.concord.biologica.engine.INucleicAcid
• interface org.concord.biologica.engine.INucleicAcidHolder